BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020G02LP1|AL427658
(672 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1776 1252 0.0
>3x_Contig1776
Length = 26138
Score = 1252 bits (628), Expect = 0.0
Identities = 662/672 (98%), Gaps = 4/672 (0%)
Strand = Plus / Minus
Query: 1 aggtcactgatttgagactatatgawttgaagaggcgcataagggtgttgccgctgattt 60
||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||
Sbjct: 20577 aggtcactgatttgagactatatgatttgaag-ggcgc-taagggtgttgccgctgattt 20520
Query: 61 gtcccacattccaaccaattctaccgtgactggtttcactccagaatctaaggaatccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20519 gtcccacattccaaccaattctaccgtgactggtttcactccagaatctaaggaatccca 20460
Query: 121 agctgaactagcagctgctttgaaggataccgaagttgtcttgattccagcaggtgttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20459 agctgaactagcagctgctttgaaggataccgaagttgtcttgattccagcaggtgttcc 20400
Query: 181 aagaaagccaggtatgacacgtgacgacttgttctctatcaatgctggtattgttcgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20399 aagaaagccaggtatgacacgtgacgacttgttctctatcaatgctggtattgttcgtga 20340
Query: 241 tttggctggtgccattgccaagaatgctccaaacgctgccatcttggtcatctactaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 20339 tttggctggtgccattgccaagaatgctccaaacgctgccatcttggtcatct-ctaacc 20281
Query: 301 cagttaamtctacagttccaattgttgccgaagtgttgaaacaaaacggtgtttacaacc 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20280 cagttaactctacagttccaattgttgccgaagtgttgaaacaaaacggtgtttacaacc 20221
Query: 361 caaagaagttgttcggtgtcaccacattggatgtgatccgttcctccagatttattatct 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 20220 caaagaagttgttcggtgtcaccacattggatgtgatccgttcctccagatttatt-tct 20162
Query: 421 gagataaggaacaccgatccaaccaccgaacgtgtcaccgttgtyggtggtyactctggt 480
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 20161 gagataaggaacaccgatccaaccaccgaacgtgtcaccgttgtcggtggtcactctggt 20102
Query: 481 awtaccattctaccattgatctctcaaactaaacacaagtcgatgattcaaggtgaaact 540
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20101 attaccattctaccattgatctctcaaactaaacacaagtcgatgattcaaggtgaaact 20042
Query: 541 ttggacaaattggtccacagaatccaattcggtggtgatgaagttgtccaagccaagaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20041 ttggacaaattggtccacagaatccaattcggtggtgatgaagttgtccaagccaagaac 19982
Query: 601 ggtgccggttctgctactctatctatkgctgaagctggtgctcgtttcgccaacagcgtg 660
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 19981 ggtgccggttctgctactctatctatggctgaagctggtgctcgtttcgccaacagcgtg 19922
Query: 661 ttggctggtttc 672
||||||||||||
Sbjct: 19921 ttggctggtttc 19910
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4221
Number of Sequences: 1807
Number of extensions: 4221
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 1
length of query: 672
length of database: 10,358,551
effective HSP length: 16
effective length of query: 656
effective length of database: 10,329,639
effective search space: 6776243184
effective search space used: 6776243184
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)